Basic Information
Locus ID:
Chr06G016740
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 19434900 | 19448497 | - | Chr06G016740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 103 | 298 | 1.0717E-97 | - |
| Pfam | PF00183 | Hsp90 protein | 281 | 762 | 2.7E-187 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 116 | 276 | 5.2E-11 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 355 | 608 | 1.06E-85 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 94 | 308 | 4.32E-61 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 633 | 753 | 3.53E-31 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 82 | 323 | 1.6E-86 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 353 | 522 | 1.1E-70 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 610 | 756 | 3.3E-50 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 523 | 609 | 8.4E-32 | - |
| SMART | SM00387 | HKATPase_4 | 116 | 278 | 0.0047 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 73 | 795 | 2.2E-235 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 114 | 123 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 284 | 302 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 182 | 199 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 115 | 137 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 211 | 233 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 164 | 181 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 94 | 114 | 3.6E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 266 | 283 | 3.6E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 91 | 754 | 25.939703 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 764 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 764 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 42 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_025808408.1 | heat shock protein 90-6, mitochondrial [Panicum hallii] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WPE3 | HATPase_c domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01364 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology