Basic Information
Locus ID:
Chr06G016470
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 19107061 | 19117034 | + | Chr06G016470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 385 | 442 | 4.9E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 228 | 284 | 3.6E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 376 | 444 | 7.19E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 226 | 286 | 6.28E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 213 | 287 | 1.7E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 369 | 445 | 1.5E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 384 | 443 | 6.1E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 227 | 285 | 1.3E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 379 | 444 | 36.953846 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 228 | 286 | 23.444946 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 347 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_004962924.1 | probable WRKY transcription factor 3 [Setaria italica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5W542 | Putative WRKY transcription factor 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology