HalophFGD

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Basic Information
Locus ID: Chr06G015900
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Short Name: CPK1
Description: Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000006 18094497 18097110 + Chr06G015900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00051 EFh 502 562 1.07529E-19 IPR002048
CDD cd00051 EFh 431 490 8.93482E-20 IPR002048
CDD cd05117 STKc_CAMK 124 382 3.29949E-144 -
Pfam PF13499 EF-hand domain pair 431 491 5.4E-11 IPR002048
Pfam PF00069 Protein kinase domain 125 383 1.0E-73 IPR000719
Pfam PF13499 EF-hand domain pair 502 562 7.6E-13 IPR002048
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 123 384 2.02E-83 IPR011009
SUPERFAMILY SSF47473 EF-hand 412 563 4.73E-47 IPR011992
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 211 407 8.3E-59 -
Gene3D G3DSA:1.10.238.10 - 408 566 3.4E-59 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 127 210 2.1E-26 -
SMART SM00054 efh_1 502 530 6.1E-4 IPR002048
SMART SM00220 serkin_6 125 383 1.9E-96 IPR000719
SMART SM00054 efh_1 466 494 0.014 IPR002048
SMART SM00054 efh_1 536 564 1.2E-6 IPR002048
SMART SM00054 efh_1 430 458 4.2E-8 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 462 497 10.329096 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 426 461 16.493979 IPR002048
ProSiteProfiles PS50011 Protein kinase domain profile. 125 383 47.254921 IPR000719
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 536 567 11.668075 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 498 533 14.987627 IPR002048
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 245 257 - IPR008271
ProSitePatterns PS00018 EF-hand calcium-binding domain. 475 487 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 511 523 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 439 451 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 545 557 - IPR018247
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 131 158 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 24 57 - -
MobiDBLite mobidb-lite consensus disorder prediction 24 99 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005509 (calcium ion binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K13412 (calcium-dependent protein kinase [EC:2.7.11.1])
Pathway:
ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G04870.1 calcium dependent protein kinase 1. A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. 0
RefSeq XP_044949867.1 calcium-dependent protein kinase 27-like isoform X1 [Hordeum vulgare subsp. vulgare] 0
Swiss-Prot Q2QQR2 Calcium-dependent protein kinase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK27 PE=3 SV=1 0
TrEMBL A0A5J9WSF1 Calcium-dependent protein kinase 20 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01620 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 21 jg11725, jg14382, jg15176, jg16355, jg16917, jg19366, jg3681 ...
jg20425, jg21514, jg21886, jg23000, jg23516, jg26104, jg31889, jg31897, jg37691, jg38607, jg39387, jg4759, jg6506, jg8517
Aizoaceae Mesembryanthemum crystallinum 11 gene_100, gene_10179, gene_10344, gene_12265, gene_14694 ...
gene_15273, gene_1547, gene_21794, gene_2331, gene_8423, gene_9788
Amaranthaceae Atriplex hortensis 11 Ah002919, Ah003065, Ah004531, Ah005084, Ah005588, Ah006573 ...
Ah008733, Ah009843, Ah017529, Ah022667, Ah036100
Amaranthaceae Beta vulgaris 9 BVRB_1g001080, BVRB_4g073820, BVRB_4g077520, BVRB_4g088370 ...
BVRB_5g099670, BVRB_5g108920, BVRB_5g109120, BVRB_8g186280, BVRB_9g215750
Amaranthaceae Salicornia bigelovii 22 Sbi_jg11219, Sbi_jg15794, Sbi_jg15820, Sbi_jg17311 ...
Sbi_jg17776, Sbi_jg18146, Sbi_jg23958, Sbi_jg29447, Sbi_jg305, Sbi_jg36207, Sbi_jg36473, Sbi_jg3690, Sbi_jg39982, Sbi_jg40146, Sbi_jg46194, Sbi_jg50065, Sbi_jg55312, Sbi_jg56578, Sbi_jg56618, Sbi_jg61948, Sbi_jg62434, Sbi_jg7790
Amaranthaceae Salicornia europaea 11 Seu_jg1010, Seu_jg12239, Seu_jg13797, Seu_jg13821, Seu_jg569 ...
Seu_jg14353, Seu_jg1713, Seu_jg20521, Seu_jg4315, Seu_jg4493, Seu_jg6284
Amaranthaceae Suaeda aralocaspica 13 GOSA_00000764, GOSA_00001116, GOSA_00001875, GOSA_00005434 ...
GOSA_00006690, GOSA_00006691, GOSA_00007222, GOSA_00011320, GOSA_00012122, GOSA_00014108, GOSA_00015474, GOSA_00022157, GOSA_00029161
Amaranthaceae Suaeda glauca 24 Sgl08738, Sgl10326, Sgl10704, Sgl12139, Sgl15494, Sgl16039 ...
Sgl16060, Sgl17427, Sgl23359, Sgl25358, Sgl28473, Sgl30534, Sgl46313, Sgl51027, Sgl51348, Sgl52606, Sgl52607, Sgl56333, Sgl56595, Sgl57897, Sgl61842, Sgl62129, Sgl66693, Sgl83114
Amaranthaceae Chenopodium album 29 gene:ENSEOMG00000007021, gene:ENSEOMG00000008253 ...
gene:ENSEOMG00000009477, gene:ENSEOMG00000010691, gene:ENSEOMG00000011840, gene:ENSEOMG00000012347, gene:ENSEOMG00000016169, gene:ENSEOMG00000016706, gene:ENSEOMG00000019910, gene:ENSEOMG00000020916, gene:ENSEOMG00000022750, gene:ENSEOMG00000024107, gene:ENSEOMG00000024890, gene:ENSEOMG00000024900, gene:ENSEOMG00000026889, gene:ENSEOMG00000028558, gene:ENSEOMG00000028656, gene:ENSEOMG00000029542, gene:ENSEOMG00000033761, gene:ENSEOMG00000035728, gene:ENSEOMG00000038182, gene:ENSEOMG00000040445, gene:ENSEOMG00000040821, gene:ENSEOMG00000042303, gene:ENSEOMG00000044177, gene:ENSEOMG00000047720, gene:ENSEOMG00000047969, gene:ENSEOMG00000049203, gene:ENSEOMG00000050061
Amaranthaceae Chenopodium quinoa 17 CQ.Regalona.r1.1AG0004350, CQ.Regalona.r1.1AG0021850 ...
CQ.Regalona.r1.1BG0002540, CQ.Regalona.r1.2BG0027870, CQ.Regalona.r1.4AG0006690, CQ.Regalona.r1.4AG0013170, CQ.Regalona.r1.4AG0022590, CQ.Regalona.r1.4BG0002380, CQ.Regalona.r1.4BG0015470, CQ.Regalona.r1.4BG0023850, CQ.Regalona.r1.5AG0006580, CQ.Regalona.r1.5BG0006820, CQ.Regalona.r1.5BG0012200, CQ.Regalona.r1.7BG0004420, CQ.Regalona.r1.8AG0001790, CQ.Regalona.r1.8BG0001700, CQ.Regalona.r1.9AG0020230
Anacardiaceae Pistacia vera 14 pistato.v30036180, pistato.v30048940, pistato.v30050590 ...
pistato.v30069430, pistato.v30108310, pistato.v30135190, pistato.v30156640, pistato.v30158300, pistato.v30169190, pistato.v30202940, pistato.v30276900, pistato.v30277030, pistato.v30277100, pistato.v30286800
Apiaceae Apium graveolens 18 Ag10G00470, Ag10G02901, Ag11G04490, Ag11G05037, Ag1G01019 ...
Ag2G00788, Ag2G01602, Ag3G00683, Ag3G00690, Ag4G01847, Ag4G01925, Ag5G01315, Ag5G02682, Ag6G01692, Ag7G00598, Ag7G02349, Ag9G00969, Ag9G01477
Arecaceae Cocos nucifera 13 COCNU_06G003440, COCNU_06G011870, COCNU_09G005690 ...
COCNU_12G005140, COCNU_14G001940, COCNU_14G007810, COCNU_15G002380, scaffold001753G000020, scaffold003239G000020, scaffold006962G000030, scaffold010979G000020, scaffold017406G000010, scaffold036482G000010
Arecaceae Phoenix dactylifera 17 gene-LOC103695544, gene-LOC103698021, gene-LOC103701286 ...
gene-LOC103704957, gene-LOC103705099, gene-LOC103706309, gene-LOC103709017, gene-LOC103713516, gene-LOC103714529, gene-LOC103716002, gene-LOC103716834, gene-LOC103717626, gene-LOC103717884, gene-LOC103719110, gene-LOC103721833, gene-LOC103723419, gene-LOC120108401
Asparagaceae Asparagus officinalis 16 AsparagusV1_01.1035.V1.1, AsparagusV1_01.1895.V1.1 ...
AsparagusV1_01.3361.V1.1, AsparagusV1_01.391.V1.1, AsparagusV1_02.1983.V1.1, AsparagusV1_02.710.V1.1, AsparagusV1_03.1251.V1.1, AsparagusV1_03.423.V1.1, AsparagusV1_03.429.V1.1, AsparagusV1_04.2188.V1.1, AsparagusV1_05.1643.V1.1, AsparagusV1_05.1660.V1.1, AsparagusV1_07.2340.V1.1, AsparagusV1_09.991.V1.1, AsparagusV1_10.1797.V1.1, AsparagusV1_Unassigned.410.V1.1
Asteraceae Flaveria trinervia 25 Ftri11G27024, Ftri12G31052, Ftri12G33476, Ftri12G33979 ...
Ftri13G32777, Ftri14G04984, Ftri15G31545, Ftri16G16401, Ftri16G21344, Ftri17G10673, Ftri17G29397, Ftri18G07727, Ftri18G12285, Ftri18G13008, Ftri18G24497, Ftri1G21438, Ftri2G04406, Ftri2G30124, Ftri4G09160, Ftri5G03887, Ftri5G20163, Ftri6G10402, Ftri6G17467, Ftri7G08597, Ftri8G19970
Brassicaceae Arabidopsis thaliana 20 AT1G35670.1, AT1G50700.1, AT1G61950.1, AT1G76040.2 ...
AT2G17290.1, AT2G38910.1, AT3G10660.1, AT3G20410.1, AT4G04710.1, AT4G04720.1, AT4G04740.2, AT4G09570.1, AT4G21940.2, AT4G23650.1, AT4G35310.1, AT4G38230.2, AT5G04870.1, AT5G12180.1, AT5G19360.1, AT5G23580.1
Brassicaceae Eutrema salsugineum 20 Thhalv10001816m.g.v1.0, Thhalv10004083m.g.v1.0 ...
Thhalv10012990m.g.v1.0, Thhalv10013236m.g.v1.0, Thhalv10013240m.g.v1.0, Thhalv10017647m.g.v1.0, Thhalv10018359m.g.v1.0, Thhalv10019860m.g.v1.0, Thhalv10020268m.g.v1.0, Thhalv10020475m.g.v1.0, Thhalv10022628m.g.v1.0, Thhalv10023804m.g.v1.0, Thhalv10024803m.g.v1.0, Thhalv10024899m.g.v1.0, Thhalv10025058m.g.v1.0, Thhalv10026767m.g.v1.0, Thhalv10027200m.g.v1.0, Thhalv10028567m.g.v1.0, Thhalv10028598m.g.v1.0, Thhalv10028617m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g37540.v2.2, Sp2g02620.v2.2, Sp2g23610.v2.2 ...
Sp3g08980.v2.2, Sp3g18420.v2.2, Sp3g30640.v2.2, Sp4g21290.v2.2, Sp5g31150.v2.2, Sp6g04200.v2.2, Sp6g08040.v2.2, Sp6g25050.v2.2, Sp6g31460.v2.2, Sp6g37950.v2.2, Sp7g20130.v2.2, Sp7g21580.v2.2, Sp7g33110.v2.2, Sp7g37500.v2.2, SpUn0654_0010.v2.2
Brassicaceae Brassica nigra 30 BniB01g006110.2N, BniB01g006950.2N, BniB01g054380.2N ...
BniB02g013560.2N, BniB02g043330.2N, BniB02g049940.2N, BniB02g055770.2N, BniB02g059140.2N, BniB02g080650.2N, BniB02g087460.2N, BniB03g036430.2N, BniB03g065050.2N, BniB04g026370.2N, BniB05g000900.2N, BniB05g003060.2N, BniB05g013520.2N, BniB05g015130.2N, BniB05g025480.2N, BniB05g044320.2N, BniB05g056000.2N, BniB06g030590.2N, BniB07g024900.2N, BniB07g031370.2N, BniB07g040620.2N, BniB07g050590.2N, BniB08g001880.2N, BniB08g005720.2N, BniB08g024960.2N, BniB08g035430.2N, BniB08g047630.2N
Casuarinaceae Casuarina equisetifolia 10 Ceq01G1306, Ceq03G0247, Ceq03G0830, Ceq03G1015, Ceq04G1244 ...
Ceq04G1254, Ceq05G1605, Ceq07G1797, Ceq07G1799, Ceq08G1618
Casuarinaceae Casuarina glauca 10 Cgl01G1461, Cgl03G0292, Cgl03G0904, Cgl03G1100, Cgl04G1406 ...
Cgl04G1415, Cgl05G1601, Cgl07G1954, Cgl07G1956, Cgl08G1657
Cymodoceaceae Cymodocea nodosa 16 gene.Cymno01g00100, gene.Cymno01g12280, gene.Cymno02g10820 ...
gene.Cymno03g04590, gene.Cymno04g13190, gene.Cymno05g14330, gene.Cymno07g01460, gene.Cymno07g09040, gene.Cymno08g07620, gene.Cymno10g08430, gene.Cymno13g01160, gene.Cymno14g07400, gene.Cymno15g00760, gene.Cymno16g02260, gene.Cymno17g05540, gene.Cymno18g01710
Dunaliellaceae Dunaliella salina 6 Dusal.0190s00005.v1.0, Dusal.0206s00016.v1.0 ...
Dusal.0224s00021.v1.0, Dusal.0272s00004.v1.0, Dusal.0933s00003.v1.0, Dusal.1941s00001.v1.0
Hydrocharitaceae Thalassia testudinum 15 gene.Thate01g09490, gene.Thate02g02970, gene.Thate02g03040 ...
gene.Thate02g13120, gene.Thate02g39750, gene.Thate04g03190, gene.Thate05g13720, gene.Thate05g22480, gene.Thate06g09940, gene.Thate07g01440, gene.Thate07g10440, gene.Thate08g03330, gene.Thate08g10240, gene.Thate09g04200, gene.Thate09g15430
Malvaceae Hibiscus hamabo Siebold & Zucc. 12 nbisL1-mrna-11227, nbisL1-mrna-1384, nbisL1-mrna-1855 ...
nbisL1-mrna-3875, nbisL1-mrna-399, nbisL1-mrna-4074, nbisL1-mrna-5129, nbisL1-mrna-6020, nbisL1-mrna-6022, nbisL1-mrna-7286, nbisL1-mrna-9099, nbisL1-mrna-9216
Nitrariaceae Nitraria sibirica 10 evm.TU.LG01.1777, evm.TU.LG01.1876, evm.TU.LG02.2535 ...
evm.TU.LG05.1871, evm.TU.LG06.1416, evm.TU.LG06.160, evm.TU.LG08.439, evm.TU.LG09.119, evm.TU.LG10.1475, evm.TU.LG12.1123
Plantaginaceae Plantago ovata 14 Pov_00003625, Pov_00003644, Pov_00004388, Pov_00005282 ...
Pov_00005913, Pov_00007036, Pov_00017184, Pov_00020785, Pov_00022903, Pov_00024401, Pov_00036975, Pov_00037673, Pov_00039038, Pov_00040137
Plumbaginaceae Limonium bicolor 20 Lb1G05693, Lb1G06451, Lb2G11169, Lb2G11272, Lb2G12214 ...
Lb2G14691, Lb3G15940, Lb3G17843, Lb3G20062, Lb4G21684, Lb4G22051, Lb4G22053, Lb4G25826, Lb5G27607, Lb5G28136, Lb5G28162, Lb5G28164, Lb5G28166, Lb6G31508, Lb7G33091
Poaceae Echinochloa crus-galli 50 AH01.147, AH01.149, AH01.5169, AH02.2380, AH02.3620 ...
AH03.291, AH03.3159, AH04.423, AH05.121, AH05.1948, AH05.307, AH05.3490, AH07.3031, AH07.4052, AH09.1908, AH09.2076, BH01.5043, BH02.2489, BH02.3335, BH03.3344, BH03.372, BH03.3891, BH03.3894, BH04.198, BH04.455, BH05.141, BH05.2075, BH05.2076, BH05.360, BH07.2855, BH09.2076, BH09.2230, CH01.2627, CH01.454, CH01.457, CH01.5643, CH02.2668, CH02.3898, CH03.3531, CH03.441, CH04.215, CH04.448, CH05.1573, CH05.201, CH05.2149, CH05.3628, CH07.2933, CH07.3933, CH09.2217, CH09.2373
Poaceae Eleusine coracana subsp. coracana 34 gene-QOZ80_1AG0025110, gene-QOZ80_1AG0037140 ...
gene-QOZ80_1BG0075650, gene-QOZ80_1BG0087250, gene-QOZ80_2AG0141240, gene-QOZ80_2AG0151690, gene-QOZ80_2BG0196850, gene-QOZ80_2BG0207070, gene-QOZ80_3AG0213220, gene-QOZ80_3AG0213250, gene-QOZ80_3AG0232180, gene-QOZ80_3BG0258360, gene-QOZ80_3BG0258390, gene-QOZ80_3BG0295760, gene-QOZ80_4AG0306230, gene-QOZ80_4AG0307530, gene-QOZ80_4BG0337210, gene-QOZ80_4BG0338570, gene-QOZ80_5AG0361610, gene-QOZ80_5AG0368640, gene-QOZ80_5AG0383090, gene-QOZ80_5AG0390430, gene-QOZ80_5BG0410010, gene-QOZ80_5BG0416210, gene-QOZ80_5BG0429980, gene-QOZ80_5BG0438070, gene-QOZ80_7AG0556450, gene-QOZ80_7AG0569130, gene-QOZ80_7BG0587370, gene-QOZ80_7BG0600840, gene-QOZ80_9AG0671330, gene-QOZ80_9AG0673660, gene-QOZ80_9BG0694810, gene-QOZ80_9BG0697370
Poaceae Hordeum vulgare 18 HORVU.MOREX.r3.1HG0069650.1, HORVU.MOREX.r3.1HG0092880.1 ...
HORVU.MOREX.r3.2HG0141400.1, HORVU.MOREX.r3.2HG0151360.1, HORVU.MOREX.r3.2HG0188200.1, HORVU.MOREX.r3.2HG0196120.1, HORVU.MOREX.r3.3HG0273330.1, HORVU.MOREX.r3.3HG0295710.1, HORVU.MOREX.r3.4HG0349000.1, HORVU.MOREX.r3.4HG0356730.1, HORVU.MOREX.r3.4HG0410700.1, HORVU.MOREX.r3.5HG0450250.1, HORVU.MOREX.r3.5HG0451470.1, HORVU.MOREX.r3.5HG0462150.1, HORVU.MOREX.r3.5HG0517140.1, HORVU.MOREX.r3.5HG0517190.1, HORVU.MOREX.r3.6HG0604810.1, HORVU.MOREX.r3.6HG0633900.1
Poaceae Lolium multiflorum 17 gene-QYE76_000105, gene-QYE76_002733, gene-QYE76_003401 ...
gene-QYE76_013914, gene-QYE76_015112, gene-QYE76_024533, gene-QYE76_041012, gene-QYE76_042584, gene-QYE76_045491, gene-QYE76_055890, gene-QYE76_059455, gene-QYE76_061395, gene-QYE76_061398, gene-QYE76_064724, gene-QYE76_064780, gene-QYE76_065211, gene-QYE76_071195
Poaceae Oryza coarctata 37 Oco01G014860, Oco01G022770, Oco02G015190, Oco02G023490 ...
Oco03G026300, Oco04G019160, Oco04G026730, Oco05G001720, Oco05G025590, Oco05G025640, Oco06G001700, Oco06G026440, Oco06G026480, Oco07G012990, Oco07G014130, Oco08G012570, Oco08G013630, Oco09G012890, Oco10G013030, Oco10G017870, Oco13G001830, Oco13G008530, Oco14G001940, Oco14G009000, Oco19G009090, Oco20G008950, Oco21G000510, Oco21G002160, Oco22G001320, Oco22G003020, Oco22G009450, Oco23G001290, Oco23G001700, Oco23G002760, Oco23G006580, Oco24G002250, Oco24G006260
Poaceae Oryza sativa 19 LOC_Os01g43410.1, LOC_Os01g59360.1, LOC_Os02g46090.1 ...
LOC_Os02g58520.1, LOC_Os03g03660.1, LOC_Os03g57450.1, LOC_Os03g57510.1, LOC_Os04g47300.1, LOC_Os04g49510.1, LOC_Os05g41270.1, LOC_Os05g50810.1, LOC_Os07g06740.2, LOC_Os07g33110.2, LOC_Os10g39420.1, LOC_Os11g04170.1, LOC_Os11g07040.1, LOC_Os12g03970.1, LOC_Os12g07230.1, LOC_Os12g30150.1
Poaceae Paspalum vaginatum 18 gene-BS78_01G055800, gene-BS78_01G056100 ...
gene-BS78_01G495800, gene-BS78_02G040700, gene-BS78_02G292800, gene-BS78_03G199500, gene-BS78_03G311200, gene-BS78_04G236100, gene-BS78_04G330400, gene-BS78_05G033400, gene-BS78_05G078200, gene-BS78_05G163600, gene-BS78_06G189700, gene-BS78_06G199500, gene-BS78_08G041900, gene-BS78_08G071900, gene-BS78_09G186500, gene-BS78_09G252000
Poaceae Puccinellia tenuiflora 30 Pt_Chr0100525, Pt_Chr0103715, Pt_Chr0103732, Pt_Chr0104160 ...
Pt_Chr0104192, Pt_Chr0105293, Pt_Chr0105298, Pt_Chr0105316, Pt_Chr0105318, Pt_Chr0203770, Pt_Chr0301610, Pt_Chr0301666, Pt_Chr0301673, Pt_Chr0303569, Pt_Chr0304179, Pt_Chr0306599, Pt_Chr0307542, Pt_Chr0502419, Pt_Chr0504422, Pt_Chr0504481, Pt_Chr0505777, Pt_Chr0601773, Pt_Chr0603416, Pt_Chr0603436, Pt_Chr0604858, Pt_Chr0605529, Pt_Chr0702970, Pt_Chr0702974, Pt_Chr0703369, Pt_Chr0703495
Poaceae Sporobolus alterniflorus 53 Chr01G003210, Chr01G017970, Chr01G038360, Chr02G006840 ...
Chr02G014990, Chr03G011350, Chr03G018330, Chr04G005520, Chr04G015250, Chr04G021660, Chr04G023060, Chr04G030210, Chr05G018770, Chr05G026570, Chr06G004910, Chr06G015900, Chr06G023280, Chr06G024790, Chr07G006050, Chr07G020580, Chr07G021730, Chr07G029280, Chr08G011550, Chr09G023260, Chr0G004760, Chr0G005860, Chr0G019960, Chr0G033790, Chr12G001070, Chr12G035100, Chr15G000080, Chr15G006420, Chr16G010170, Chr18G012710, Chr18G016280, Chr19G005680, Chr19G010620, Chr19G012720, Chr22G000270, Chr22G005010, Chr23G005560, Chr23G006650, Chr24G001130, Chr24G008530, Chr26G013980, Chr27G003190, Chr27G005490, Chr27G011620, Chr28G001240, Chr28G007850, Chr30G004510, Chr31G000630, Chr31G001640
Poaceae Thinopyrum elongatum 18 Tel1E01G498800, Tel1E01G712500, Tel2E01G414800 ...
Tel2E01G460400, Tel2E01G696300, Tel2E01G773300, Tel3E01G384800, Tel3E01G533600, Tel4E01G176000, Tel4E01G202800, Tel4E01G529700, Tel5E01G202700, Tel5E01G244900, Tel5E01G668200, Tel5E01G668500, Tel6E01G484400, Tel6E01G786400, Telscf2101G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG045970, gene_TRIDC1AG062430 ...
gene_TRIDC1BG052010, gene_TRIDC1BG071580, gene_TRIDC2AG029830, gene_TRIDC2AG033800, gene_TRIDC2AG058740, gene_TRIDC2AG065100, gene_TRIDC2BG033530, gene_TRIDC2BG038220, gene_TRIDC2BG061760, gene_TRIDC2BG069500, gene_TRIDC3AG033670, gene_TRIDC3AG048090, gene_TRIDC3BG038210, gene_TRIDC3BG054220, gene_TRIDC4AG030020, gene_TRIDC4AG032780, gene_TRIDC4BG017040, gene_TRIDC4BG020540, gene_TRIDC5AG016950, gene_TRIDC5AG023440, gene_TRIDC5AG061700, gene_TRIDC5AG061750, gene_TRIDC5AG069790, gene_TRIDC5BG018720, gene_TRIDC5BG019150, gene_TRIDC5BG024550, gene_TRIDC5BG065760, gene_TRIDC5BG065810, gene_TRIDC6AG040110, gene_TRIDC6AG061550, gene_TRIDC6BG047030, gene_TRIDC6BG068590
Poaceae Triticum aestivum 53 TraesCS1A02G309400.2, TraesCS1A02G424200.1 ...
TraesCS1B02G320400.1, TraesCS1B02G456700.1, TraesCS1D02G308800.1, TraesCS1D02G433400.1, TraesCS2A02G223100.2, TraesCS2A02G248200.3, TraesCS2A02G407200.1, TraesCS2A02G456100.1, TraesCS2B02G248700.2, TraesCS2B02G269200.3, TraesCS2B02G424900.1, TraesCS2B02G478100.1, TraesCS2D02G229100.2, TraesCS2D02G249900.2, TraesCS2D02G404200.1, TraesCS2D02G456400.1, TraesCS3A02G224900.1, TraesCS3A02G334200.1, TraesCS3B02G254500.1, TraesCS3B02G365200.1, TraesCS3D02G228700.1, TraesCS3D02G327700.3, TraesCS4A02G187900.1, TraesCS4A02G206200.2, TraesCS4B02G109800.2, TraesCS4B02G130300.1, TraesCS4B02G321800.1, TraesCS4D02G107200.1, TraesCS4D02G125500.1, TraesCS4D02G318400.2, TraesCS5A02G107900.1, TraesCS5A02G138300.1, TraesCS5A02G426500.1, TraesCS5A02G426800.2, TraesCS5A02G490200.1, TraesCS5B02G109300.1, TraesCS5B02G115400.1, TraesCS5B02G137600.1, TraesCS5B02G428400.2, TraesCS5B02G428700.1, TraesCS5D02G122800.1, TraesCS5D02G124000.1, TraesCS5D02G153800.1, TraesCS5D02G434500.2, TraesCS5D02G434800.2, TraesCS6A02G261200.1, TraesCS6A02G421000.1, TraesCS6B02G288600.1, TraesCS6B02G467300.1, TraesCS6D02G242000.2, TraesCS6D02G404800.1
Poaceae Zea mays 25 Zm00001eb002180_P002, Zm00001eb060110_P001 ...
Zm00001eb060140_P001, Zm00001eb072810_P001, Zm00001eb091710_P003, Zm00001eb093410_P001, Zm00001eb105890_P001, Zm00001eb117300_P001, Zm00001eb132720_P001, Zm00001eb139060_P001, Zm00001eb150340_P001, Zm00001eb159530_P001, Zm00001eb187630_P001, Zm00001eb190570_P003, Zm00001eb196210_P001, Zm00001eb200920_P001, Zm00001eb213240_P001, Zm00001eb213280_P001, Zm00001eb322620_P001, Zm00001eb344900_P001, Zm00001eb358560_P001, Zm00001eb369270_P001, Zm00001eb408020_P001, Zm00001eb428080_P002, Zm00001eb429270_P001
Poaceae Zoysia japonica 26 nbis-gene-11651, nbis-gene-11652, nbis-gene-14309 ...
nbis-gene-15295, nbis-gene-15301, nbis-gene-16423, nbis-gene-16426, nbis-gene-22235, nbis-gene-22667, nbis-gene-24732, nbis-gene-25547, nbis-gene-25717, nbis-gene-26926, nbis-gene-27145, nbis-gene-29210, nbis-gene-3052, nbis-gene-31376, nbis-gene-39729, nbis-gene-40127, nbis-gene-41249, nbis-gene-46280, nbis-gene-4637, nbis-gene-51510, nbis-gene-5665, nbis-gene-58716, nbis-gene-893
Poaceae Zoysia macrostachya 25 Zma_g10680, Zma_g11372, Zma_g16895, Zma_g17489, Zma_g17628 ...
Zma_g18473, Zma_g20228, Zma_g20310, Zma_g2166, Zma_g21853, Zma_g24690, Zma_g24805, Zma_g25812, Zma_g2607, Zma_g2610, Zma_g26954, Zma_g28895, Zma_g325, Zma_g329, Zma_g4513, Zma_g5227, Zma_g6018, Zma_g6519, Zma_g8248, Zma_g8840
Portulacaceae Portulaca oleracea 27 evm.TU.LG02.1571, evm.TU.LG02.1597, evm.TU.LG04.2007 ...
evm.TU.LG04.2740, evm.TU.LG06.1363, evm.TU.LG06.325, evm.TU.LG08.1423, evm.TU.LG08.1424, evm.TU.LG08.394, evm.TU.LG08.411, evm.TU.LG08.904, evm.TU.LG09.366, evm.TU.LG09.396, evm.TU.LG10.446, evm.TU.LG11.703, evm.TU.LG12.1756, evm.TU.LG17.444, evm.TU.LG18.1682, evm.TU.LG18.1898, evm.TU.LG18.866, evm.TU.LG19.1453, evm.TU.LG20.1005, evm.TU.LG20.203, evm.TU.LG20.24, evm.TU.LG22.1022, evm.TU.LG22.320, evm.TU.LG26.541
Posidoniaceae Posidonia oceanica 11 gene.Posoc01g30060, gene.Posoc02g10860, gene.Posoc03g00270 ...
gene.Posoc03g22970, gene.Posoc05g17090, gene.Posoc05g19840, gene.Posoc06g15500, gene.Posoc07g01720, gene.Posoc07g09200, gene.Posoc09g08230, gene.Posoc10g02880
Rhizophoraceae Bruguiera sexangula 13 evm.TU.60359.6, evm.TU.60360.6, evm.TU.Scaffold_12_RagTag.84 ...
evm.TU.Scaffold_12_RagTag.997, evm.TU.Scaffold_13_RagTag.980, evm.TU.Scaffold_16_RagTag.124, evm.TU.Scaffold_1_RagTag.1080, evm.TU.Scaffold_1_RagTag.1302, evm.TU.Scaffold_1_RagTag.1313, evm.TU.Scaffold_1_RagTag.2398, evm.TU.Scaffold_7_RagTag.1316, evm.TU.Scaffold_7_RagTag.409, evm.TU.Scaffold_8_RagTag.1558
Rhizophoraceae Carallia pectinifolia 12 nbisL1-mrna-18441, nbisL1-mrna-18865, nbisL1-mrna-22366 ...
nbisL1-mrna-23945, nbisL1-mrna-24716, nbisL1-mrna-30038, nbisL1-mrna-5171, nbisL1-mrna-6283, nbisL1-mrna-6293, nbisL1-mrna-6528, nbisL1-mrna-8661, nbisL1-mrna-9786
Rhizophoraceae Ceriops tagal 13 nbisL1-mrna-11869, nbisL1-mrna-13481, nbisL1-mrna-14683 ...
nbisL1-mrna-15705, nbisL1-mrna-1616, nbisL1-mrna-16693, nbisL1-mrna-18138, nbisL1-mrna-18146, nbisL1-mrna-20607, nbisL1-mrna-21442, nbisL1-mrna-3030, nbisL1-mrna-4401, nbisL1-mrna-5607
Rhizophoraceae Ceriops zippeliana 11 nbisL1-mrna-10185, nbisL1-mrna-13064, nbisL1-mrna-13286 ...
nbisL1-mrna-15130, nbisL1-mrna-18059, nbisL1-mrna-20361, nbisL1-mrna-21128, nbisL1-mrna-21701, nbisL1-mrna-3184, nbisL1-mrna-4129, nbisL1-mrna-4137
Rhizophoraceae Kandelia candel 12 evm.TU.utg000002l.299, evm.TU.utg000002l.469 ...
evm.TU.utg000015l.584, evm.TU.utg000016l.12, evm.TU.utg000016l.379, evm.TU.utg000016l.386, evm.TU.utg000016l.863, evm.TU.utg000018l.692, evm.TU.utg000018l.89, evm.TU.utg000022l.419, evm.TU.utg000027l.37, evm.TU.utg000027l.520
Rhizophoraceae Kandelia obovata 11 Maker00002891, Maker00003685, Maker00011661, Maker00011954 ...
Maker00014224, Maker00015898, Maker00016284, Maker00017007, Maker00017157, Maker00017396, Maker00017978
Rhizophoraceae Rhizophora apiculata 13 nbisL1-mrna-10705, nbisL1-mrna-11047, nbisL1-mrna-12505 ...
nbisL1-mrna-3560, nbisL1-mrna-4490, nbisL1-mrna-4571, nbisL1-mrna-5477, nbisL1-mrna-7550, nbisL1-mrna-7556, nbisL1-mrna-8769, nbisL1-mrna-9001, nbisL1-mrna-9438, nbisL1-mrna-9595
Rhizophoraceae Rhizophora mangle 13 nbisL1-mrna-11621, nbisL1-mrna-13288, nbisL1-mrna-13484 ...
nbisL1-mrna-13491, nbisL1-mrna-18522, nbisL1-mrna-18689, nbisL1-mrna-20083, nbisL1-mrna-20812, nbisL1-mrna-22522, nbisL1-mrna-22719, nbisL1-mrna-23273, nbisL1-mrna-5672, nbisL1-mrna-6724
Salicaceae Populus euphratica 18 populus_peu01795, populus_peu03631, populus_peu06041 ...
populus_peu10323, populus_peu12376, populus_peu12386, populus_peu15408, populus_peu16631, populus_peu18502, populus_peu18929, populus_peu19746, populus_peu19758, populus_peu19903, populus_peu25994, populus_peu26003, populus_peu34472, populus_peu36023, populus_peu36941
Solanaceae Lycium barbarum 23 gene-LOC132599409, gene-LOC132604552, gene-LOC132606303 ...
gene-LOC132606687, gene-LOC132607242, gene-LOC132607254, gene-LOC132607611, gene-LOC132609915, gene-LOC132613482, gene-LOC132616196, gene-LOC132617294, gene-LOC132617847, gene-LOC132625947, gene-LOC132625966, gene-LOC132626379, gene-LOC132626381, gene-LOC132626994, gene-LOC132628149, gene-LOC132636345, gene-LOC132639963, gene-LOC132640538, gene-LOC132643647, gene-LOC132644097
Solanaceae Solanum chilense 21 SOLCI000081300, SOLCI000797600, SOLCI000938600 ...
SOLCI001317800, SOLCI001503100, SOLCI002135400, SOLCI002419800, SOLCI002509900, SOLCI003123200, SOLCI003137500, SOLCI003180800, SOLCI003418400, SOLCI003459800, SOLCI003511500, SOLCI003952100, SOLCI004169900, SOLCI004439400, SOLCI004457200, SOLCI005394900, SOLCI005760100, SOLCI007434400
Solanaceae Solanum pennellii 22 gene-LOC107001743, gene-LOC107002153, gene-LOC107002236 ...
gene-LOC107004090, gene-LOC107004840, gene-LOC107005042, gene-LOC107005509, gene-LOC107007186, gene-LOC107007192, gene-LOC107008511, gene-LOC107009560, gene-LOC107014935, gene-LOC107015024, gene-LOC107015444, gene-LOC107018053, gene-LOC107018307, gene-LOC107018336, gene-LOC107020234, gene-LOC107021066, gene-LOC107025816, gene-LOC107029060, gene-LOC107032472
Tamaricaceae Reaumuria soongarica 16 STRG.11630_chr02_-, STRG.20675_chr08_-, STRG.23388_chr05_+ ...
STRG.26471_chr11_-, gene_10610, gene_1132, gene_12207, gene_13141, gene_13237, gene_15166, gene_15444, gene_16091, gene_17574, gene_17984, gene_18010, gene_2433
Tamaricaceae Tamarix chinensis 12 TC01G3176, TC02G1376, TC03G2351, TC04G2924, TC05G2719 ...
TC05G2733, TC05G2956, TC06G0885, TC07G1649, TC08G0080, TC09G2458, TC12G0868
Zosteraceae Zostera marina 2 Zosma02g24030.v3.1, Zosma02g25780.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.