HalophFGD

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Basic Information
Locus ID: Chr06G015570
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Dienelactone hydrolase family
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000006 17489523 17491105 - Chr06G015570
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 89 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 89 113 - -
Coils Coil Coil 86 106 - -
KEGG Pathway
KO Term:
K14515 (EIN3-binding F-box protein)
Pathway:
ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant) ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034572468.1 uncharacterized protein LOC117837023 [Setaria viridis] 0
TrEMBL A0A5J9WPR9 DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01249 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH05.3564, CH05.3727, CH05.3746
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_5AG0391720, gene-QOZ80_5AG0391740 ...
gene-QOZ80_5AG0391760, gene-QOZ80_5BG0439440, gene-QOZ80_5BG0439450, gene-QOZ80_5BG0439470, gene-QOZ80_5BG0439510
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0101690.1, HORVU.MOREX.r3.2HG0101700.1
Poaceae Lolium multiflorum 3 gene-QYE76_002505, gene-QYE76_033379, gene-QYE76_035213
Poaceae Paspalum vaginatum 2 gene-BS78_08G079100, gene-BS78_08G079200
Poaceae Sporobolus alterniflorus 4 Chr06G015570, Chr06G016380, Chr06G016400, Chr06G016420
Poaceae Thinopyrum elongatum 1 Tel2E01G112000
Poaceae Triticum aestivum 7 TraesCS2A02G047700.1, TraesCS2B02G059300.1 ...
TraesCS2D02G045800.1, TraesCS2D02G046100.1, TraesCS2D02G046300.1, TraesCS2D02G046400.1, TraesCS3D02G504100.1
Poaceae Zoysia japonica 1 nbis-gene-30169
Poaceae Zoysia macrostachya 1 Zma_g25875
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.