Basic Information
Locus ID:
Chr06G014710
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 15860887 | 15863017 | + | Chr06G014710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 48 | 84 | 8.8E-9 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 250 | 332 | 8.1E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 104 | 9.81E-14 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 145 | 387 | 6.67E-7 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 45 | 97 | 1.8E-8 | - |
| SMART | SM00256 | fbox_2 | 49 | 88 | 4.8E-9 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 148 | 367 | 1.7E-26 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 43 | 88 | 10.557245 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10340.1 | F-box family protein. | 0 |
| RefSeq | XP_006662318.2 | F-box/LRR-repeat protein At2g43260-like [Oryza brachyantha] | 0 |
| Q9LX89 | F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9VF34 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology