Basic Information
Locus ID:
Chr06G012400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 12023180 | 12024833 | + | Chr06G012400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 122 | 163 | 2.9E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 163 | 3.6E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 165 | 2.8E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 117 | 2.1E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 165 | 9.375802 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25840.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039803168.1 | serine/threonine-protein kinase prpf4B-like isoform X2 [Panicum virgatum] | 0 |
| Q54WE5 | Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum OX=44689 GN=prp4k PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0UJ37 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG263100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G012400, Chr20G007810 |