Basic Information
Locus ID:
Chr06G011710
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 11198386 | 11201883 | - | Chr06G011710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00188 | Cysteine-rich secretory protein family | 58 | 92 | 4.1E-4 | IPR014044 |
| SUPERFAMILY | SSF55797 | PR-1-like | 62 | 104 | 1.96E-12 | IPR035940 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 188 | 229 | 3.6E-7 | - |
| Gene3D | G3DSA:3.40.33.10 | CAP | 61 | 124 | 5.5E-12 | IPR035940 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33720.1 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein. | 0 |
| RefSeq | XP_037408289.1 | uncharacterized protein LOC119270386 isoform X2 [Triticum dicoccoides] | 0 |
| Q40374 | Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9V1V4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21706 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH07.1728, CH07.1580 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0130770 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g27310.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G250700 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G011710 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G766100 |
| Poaceae | Triticum aestivum | 2 | TraesCS3A02G477300.1, TraesCS3D02G472000.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20992 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13506 |