Basic Information
Locus ID:
Chr06G011620
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 11122984 | 11131301 | - | Chr06G011620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 572 | 909 | 8.68688E-95 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 576 | 900 | 3.4E-13 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 549 | 932 | 2.36E-57 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 175 | 557 | 9.55E-28 | - |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 553 | 937 | 2.0E-98 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 353 | 552 | 9.2E-10 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 154 | 316 | 2.4E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 250 | 288 | 0.026 | IPR001680 |
| SMART | SM00320 | WD40_4 | 206 | 244 | 27.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 569 | 915 | 6.2E-85 | IPR000300 |
| SMART | SM00320 | WD40_4 | 467 | 504 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 427 | 465 | 32.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 506 | 543 | 220.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 99 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_039789616.1 | type II inositol polyphosphate 5-phosphatase 15-like [Panicum virgatum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V2I8 | IPPc domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21722 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology