Basic Information
Locus ID:
Chr06G009540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 9037176 | 9038390 | - | Chr06G009540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 206 | 243 | 7.5E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 52 | 85 | 3.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 49 | 94 | 3.4E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 119 | 386 | 2.88E-29 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 102 | 390 | 1.8E-25 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 48 | 101 | 2.6E-5 | - |
| SMART | SM00612 | kelc_smart | 160 | 208 | 0.021 | IPR006652 |
| SMART | SM00612 | kelc_smart | 210 | 257 | 0.0014 | IPR006652 |
| SMART | SM00256 | fbox_2 | 54 | 94 | 4.5E-5 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_034596662.1 | F-box/kelch-repeat protein SKIP20-like [Setaria viridis] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | K3Z0B2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology