Basic Information
Locus ID:
Chr05G034590
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 64255369 | 64257867 | - | Chr05G034590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 83 | 167 | 7.01917E-31 | - |
| Pfam | PF00855 | PWWP domain | 83 | 166 | 2.4E-13 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 75 | 193 | 3.01E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 71 | 174 | 1.6E-20 | - |
| SMART | SM00293 | PWWP_4 | 81 | 142 | 2.4E-4 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 83 | 144 | 12.63545 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 721 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 722 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 560 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNP3 | PWWP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology