Basic Information
Locus ID:
Chr05G033430
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 63449384 | 63453329 | - | Chr05G033430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 87 | 349 | 5.6E-86 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 87 | 335 | 2.8E-41 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 114 | 410 | 8.4E-92 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 282 | 354 | 17.06245 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 115 | 273 | 30.342985 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 378 | 395 | 3.4E-48 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 173 | 202 | 3.4E-48 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 291 | 319 | 3.4E-48 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 325 | 354 | 3.4E-48 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 206 | 235 | 3.4E-48 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 244 | 273 | 3.4E-48 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_004971229.1 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Setaria italica] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VF85 | RECA_2 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology