Basic Information
Locus ID:
Chr05G027060
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 57607899 | 57616662 | - | Chr05G027060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 634 | 900 | 1.62486E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 630 | 897 | 3.2E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 84 | 4.3E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 616 | 927 | 1.23E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 403 | 4.08E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 918 | 2.8E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 603 | 703 | 5.1E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 417 | 2.6E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 283 | 1.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 208 | 1.3E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 628 | 900 | 2.3E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 628 | 901 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 634 | 656 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 748 | 760 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 929 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 910 | 929 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012701538.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology