Basic Information
Locus ID:
Chr05G023380
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 53823648 | 53826684 | + | Chr05G023380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 77 | 5.5E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 635 | 923 | 5.5E-41 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 155 | 177 | 0.54 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 510 | 525 | 0.029 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 429 | 476 | 3.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 97 | 139 | 2.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 227 | 286 | 8.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 924 | 4.72E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 391 | 7.85E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 308 | 551 | 6.12E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 151 | 2.3E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 298 | 1.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 221 | 1.2E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 717 | 948 | 2.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 627 | 716 | 7.3E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 555 | 7.9E-68 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 60.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 633 | 928 | 5.6E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 372 | 394 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 126 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 297 | 7.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 633 | 928 | 35.862919 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 639 | 666 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 776 | 788 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 930 | 980 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology