Basic Information
Locus ID:
Chr05G016950
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 41219615 | 41223179 | - | Chr05G016950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 411 | 668 | 5.8E-34 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 198 | 4.9E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 3.2E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 668 | 8.42E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 230 | 8.93E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 135 | 2.2E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 252 | 7.2E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 477 | 1.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 671 | 1.0E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 671 | 26.647549 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004969430.1 | LRR receptor kinase SERK2 [Setaria italica] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | K3XF53 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101770040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology