Basic Information
Locus ID:
Chr05G016320
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 38668295 | 38671289 | + | Chr05G016320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 38 | 131 | 7.8E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 133 | 212 | 1.9E-8 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 302 | 494 | 2.7E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 528 | 6.61E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 131 | 216 | 9.2E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 130 | 6.8E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 375 | 1.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 537 | 7.0E-45 | - |
| SMART | SM00220 | serkin_6 | 300 | 547 | 7.6E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 602 | 33.855892 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 16 | 6.0 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 133 | 15.149139 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 328 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039813902.1 | cysteine-rich receptor-like protein kinase 2 [Panicum virgatum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VDP5 | Cysteine-rich receptor-like protein kinase 2 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology