Basic Information
Locus ID:
Chr05G016310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 38650262 | 38661338 | + | Chr05G016310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 342 | 595 | 7.4E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 199 | 250 | 3.6E-8 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 103 | 177 | 1.5E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 598 | 1.2E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 76 | 179 | 8.4E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 186 | 253 | 3.7E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 413 | 8.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 610 | 4.0E-52 | - |
| SMART | SM00220 | serkin_6 | 339 | 598 | 5.8E-30 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 77 | 179 | 17.08629 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 339 | 606 | 37.149113 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 345 | 366 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 625 | 651 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039851139.1 | cysteine-rich receptor-like protein kinase 2 [Panicum virgatum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VDP5 | Cysteine-rich receptor-like protein kinase 2 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology