Basic Information
Locus ID:
Chr05G012620
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 16164572 | 16171481 | - | Chr05G012620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 342 | 427 | 2.33651E-17 | - |
| Pfam | PF08276 | PAN-like domain | 354 | 411 | 3.3E-8 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 564 | 726 | 1.2E-27 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 153 | 226 | 3.3E-15 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 149 | 222 | 3.66E-13 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 479 | 729 | 7.15E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 467 | 549 | 1.5E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 550 | 737 | 6.9E-53 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 71 | 200 | 8.7E-10 | IPR036426 |
| SMART | SM00220 | serkin_6 | 495 | 728 | 3.5E-13 | IPR000719 |
| SMART | SM00108 | blect_4 | 82 | 203 | 3.1E-9 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 552 | 756 | 2.6E-85 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 238 | 552 | 5.6E-56 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 70 | 291 | 9.1E-27 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 495 | 729 | 23.849018 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 76 | 199 | 9.601849 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 345 | 429 | 8.236409 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 584 | 596 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_002454912.2 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Sorghum bicolor] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6QYH1 | Receptor-like serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM08G01000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology