Basic Information
Locus ID:
Chr05G011570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 13198648 | 13199616 | + | Chr05G011570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_021305441.1 | uncharacterized protein LOC110431073 [Sorghum bicolor] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7RD51 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30198590 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025322 |
| Poaceae | Oryza coarctata | 1 | Oco01G017510 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G000210, Chr05G011570, Chr05G013330, Chr0G006590 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132628466 |