Basic Information
Locus ID:
Chr05G007600
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 6625812 | 6628789 | + | Chr05G007600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 200 | 223 | 0.073 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 168 | 625 | 3.4E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 125 | 240 | 6.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 432 | 628 | 1.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 431 | 4.3E-28 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 544 | 568 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 332 | 357 | 46.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 518 | 543 | 0.004 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 226 | 251 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 174 | 199 | 0.026 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 491 | 516 | 0.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 358 | 383 | 1.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 252 | 277 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 438 | 463 | 4.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 384 | 409 | 550.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 225 | 7.4E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 464 | 489 | 0.05 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_002437255.2 | EIN3-binding F-box protein 1 [Sorghum bicolor] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology