Basic Information
Locus ID:
Chr05G006710
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
OASA1
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 5709203 | 5710291 | - | Chr05G006710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01561 | CBS_like | 1 | 203 | 3.6131E-81 | - |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 2 | 145 | 5.5E-16 | IPR001926 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 1 | 210 | 8.64E-44 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 1 | 144 | 3.0E-43 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 5 | 120 | 3.0E-43 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 160 | 212 | 2.5E-13 | IPR036052 |
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43750.1 | O-acetylserine (thiol) lyase B. Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. | 0 |
| RefSeq | XP_052159959.1 | cysteine synthase, chloroplastic/chromoplastic-like isoform X2 [Oryza glaberrima] | 0 |
| Q9XEA8 | Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0LCR1 | PALP domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology