Basic Information
Locus ID:
Chr05G006600
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 5530703 | 5533890 | + | Chr05G006600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 691 | 972 | 6.93579E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 499 | 559 | 1.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 62 | 6.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 287 | 347 | 2.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 71 | 127 | 7.3E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 687 | 971 | 1.5E-39 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 376 | 1.7E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 973 | 1.11E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 326 | 583 | 1.26E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 184 | 5.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 381 | 623 | 1.4E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 284 | 6.2E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 991 | 1.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 775 | 9.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 380 | 1.1E-24 | IPR032675 |
| SMART | SM00220 | serkin_6 | 685 | 979 | 1.4E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 546 | 570 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 521 | 545 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 310 | 333 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 309 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 44.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 974 | 37.403522 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 288 | 310 | 7.095899 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 521 | 534 | 4.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 289 | 302 | 4.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1026 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1003 | 1026 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025811826.1 | receptor-like protein kinase 5 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology