Basic Information
Locus ID:
Chr05G005670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000005 | 4635920 | 4640043 | - | Chr05G005670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 72 | 2.6E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 158 | 8.2E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 637 | 2.3E-18 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 163 | 2.04E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 368 | 635 | 1.46E-30 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 457 | 4.5E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 647 | 1.2E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 170 | 9.9E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 641 | 14.548846 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039813554.1 | protein MALE DISCOVERER 2-like isoform X1 [Panicum virgatum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UI07 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_32548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology