HalophFGD

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Basic Information
Locus ID: Chr05G003920
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000005 3100343 3102843 + Chr05G003920
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 39 70 7.19E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039835158.1 uncharacterized protein LOC120696065 [Panicum virgatum] 0
TrEMBL A0A3L6SB63 E3 ubiquitin-protein ligase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G15770 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH02.1028, AH02.1030, CH02.1205
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_1BG0054310
Poaceae Sporobolus alterniflorus 1 Chr05G003920
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.