Basic Information
Locus ID:
Chr04G030990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 65307173 | 65312516 | + | Chr04G030990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15898 | EFh_PI-PLC | 364 | 496 | 1.27414E-19 | - |
| CDD | cd05117 | STKc_CAMK | 58 | 315 | 9.411E-137 | - |
| Pfam | PF13499 | EF-hand domain pair | 434 | 497 | 1.1E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 363 | 422 | 2.7E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 58 | 316 | 7.7E-74 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 340 | 509 | 4.85E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 324 | 2.02E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 143 | 5.6E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 325 | 499 | 4.5E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 324 | 2.4E-58 | - |
| SMART | SM00054 | efh_1 | 363 | 391 | 0.0035 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 0.52 | IPR002048 |
| SMART | SM00054 | efh_1 | 435 | 463 | 0.0017 | IPR002048 |
| SMART | SM00054 | efh_1 | 471 | 499 | 3.4E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 58 | 316 | 5.1E-97 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 395 | 430 | 8.655371 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 13.286007 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 359 | 394 | 13.453381 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 316 | 48.442177 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 466 | 12.895472 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 444 | 456 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 87 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_025794993.1 | calcium-dependent protein kinase 8 [Panicum hallii] | 0 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7BZE0 | Calcium-dependent protein kinase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G039300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology