Basic Information
Locus ID:
Chr04G027180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 61199254 | 61202913 | - | Chr04G027180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 608 | 882 | 2.11883E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 1.6E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 604 | 835 | 2.0E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 344 | 378 | 3.7E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 77 | 456 | 8.84E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 590 | 904 | 1.22E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 337 | 3.0E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 680 | 896 | 2.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 563 | 679 | 1.9E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 466 | 4.4E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 2.3 | IPR003591 |
| SMART | SM00220 | serkin_6 | 602 | 888 | 3.7E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 428 | 451 | 6.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 224 | 100.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 885 | 40.187923 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 608 | 630 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 727 | 739 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 938 | 959 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 490 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_025793902.1 | receptor protein kinase TMK1-like [Panicum hallii] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WAL4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04866 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology