Basic Information
Locus ID:
Chr04G025720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
hAT family C-terminal dimerisation region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 58501427 | 58503995 | - | Chr04G025720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 42 | 107 | 5.84E-11 | IPR012337 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 231 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035822325.1 | uncharacterized protein LOC118476764 [Zea mays] | 0 |
| TrEMBL | A0A5J9VEY6 | BED-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15822 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G006240, Chr04G025720, Chr07G004450 |
| Poaceae | Zea mays | 1 | Zm00001eb307380_P001 |
| Poaceae | Zoysia japonica | 21 | nbis-gene-1111, nbis-gene-13247, nbis-gene-14314 ... |