Basic Information
Locus ID:
Chr04G024010
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 55286884 | 55290588 | + | Chr04G024010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 377 | 435 | 1.04821E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 70 | 329 | 1.85448E-132 | - |
| CDD | cd00051 | EFh | 449 | 508 | 1.44532E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 449 | 507 | 1.4E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 376 | 436 | 3.4E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 71 | 330 | 2.2E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 338 | 1.29E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 360 | 509 | 1.56E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 337 | 1.2E-57 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 338 | 509 | 1.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 156 | 5.2E-27 | - |
| SMART | SM00054 | efh_1 | 377 | 405 | 7.1E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 71 | 330 | 1.2E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 449 | 477 | 0.069 | IPR002048 |
| SMART | SM00054 | efh_1 | 482 | 510 | 7.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 413 | 441 | 0.0079 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 409 | 444 | 9.352757 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 15.322372 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 483 | 513 | 12.225983 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 330 | 47.975754 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 13.816021 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 422 | 434 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 77 | 100 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 572 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_020406694.1 | calcium-dependent protein kinase 29 [Zea mays] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WUF0 | Calcium-dependent protein kinase 30 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_02886 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology