Basic Information
Locus ID:
Chr04G021610
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 52143446 | 52148871 | + | Chr04G021610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 427 | 541 | 5.8059E-53 | - |
| CDD | cd14663 | STKc_SnRK3 | 128 | 383 | 1.89288E-171 | - |
| Pfam | PF00069 | Protein kinase domain | 129 | 384 | 1.2E-72 | IPR000719 |
| Pfam | PF03822 | NAF domain | 423 | 482 | 4.7E-23 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 125 | 418 | 1.2E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 209 | 410 | 4.2E-60 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 420 | 545 | 2.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 118 | 208 | 2.8E-32 | - |
| SMART | SM00220 | serkin_6 | 129 | 384 | 2.6E-108 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 421 | 445 | 13.221315 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 384 | 51.622326 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 248 | 260 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 135 | 158 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_052138402.1 | CBL-interacting protein kinase 32 [Oryza glaberrima] | 0 |
| Q2QY53 | CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UTC6 | non-specific serine/threonine protein kinase OS=Eragrostis curvula OX=38414 GN=EJB05_29689 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology