Basic Information
Locus ID:
Chr04G020750
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 50883176 | 50887424 | - | Chr04G020750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 453 | 992 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 36 | 421 | 7.48214E-154 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 283 | 352 | 1.3E-22 | IPR032420 |
| Pfam | PF00899 | ThiF family | 38 | 413 | 1.3E-29 | IPR000594 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 211 | 281 | 5.4E-26 | IPR032418 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 621 | 874 | 4.3E-84 | IPR019572 |
| Pfam | PF00899 | ThiF family | 434 | 934 | 8.5E-75 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 945 | 1034 | 9.7E-26 | IPR018965 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 31 | 418 | 5.49E-100 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 428 | 929 | 2.65E-128 | IPR035985 |
| Gene3D | G3DSA:2.40.30.180 | - | 199 | 280 | 2.6E-110 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 27 | 145 | 2.9E-37 | IPR042449 |
| Gene3D | G3DSA:3.40.50.12550 | - | 155 | 444 | 2.6E-110 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 606 | 881 | 4.7E-192 | IPR042063 |
| Gene3D | G3DSA:3.10.290.60 | - | 947 | 1037 | 5.9E-24 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 454 | 932 | 4.7E-192 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 912 | 1034 | 1.6E-53 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 31 | 1039 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 613 | 621 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 396 | 404 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 682 | 709 | 1.1E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 528 | 553 | 1.1E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 173 | 200 | 1.1E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 58 | 82 | 1.1E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 481 | 504 | 1.1E-66 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_034607235.1 | ubiquitin-activating enzyme E1 2 [Setaria viridis] | 0 |
| P31251 | Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum OX=4565 GN=UBA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UWN4 | E1 ubiquitin-activating enzyme OS=Eragrostis curvula OX=38414 GN=EJB05_30071 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology