Basic Information
Locus ID:
Chr04G020110
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 48924557 | 48925668 | + | Chr04G020110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 7 | 122 | 4.0E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 2 | 122 | 2.88E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 125 | 2.5E-26 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 126 | 193 | 1.1E-18 | - |
| SMART | SM00225 | BTB_4 | 15 | 124 | 1.3E-14 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 74 | 16.90024 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037462393.1 | BTB/POZ and MATH domain-containing protein 3-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CI36 | BTB domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_022567 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G020110, Chr06G021060 |