Basic Information
Locus ID:
Chr04G019630
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 48551518 | 48552060 | - | Chr04G019630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 31 | 180 | 2.96731E-64 | - |
| Pfam | PF00314 | Thaumatin family | 34 | 156 | 1.1E-31 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 29 | 180 | 1.7E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 29 | 180 | 2.0E-46 | IPR037176 |
| SMART | SM00205 | tha2 | 30 | 180 | 1.6E-29 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 160 | 7.8E-42 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 157 | 180 | 0.77 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 27 | 180 | 27.980513 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 49 | 58 | 4.0E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 170 | 179 | 4.0E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 84 | 113 | 4.0E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 29 | 41 | 4.0E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 71 | 82 | 4.0E-27 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WKV1 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology