Basic Information
Locus ID:
Chr04G018200
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 46345494 | 46359500 | - | Chr04G018200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 190 | 536 | 3.20263E-171 | - |
| Pfam | PF00225 | Kinesin motor domain | 196 | 527 | 5.9E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 190 | 559 | 2.55E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 185 | 539 | 1.9E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 188 | 535 | 7.3E-167 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 190 | 527 | 122.326912 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 423 | 434 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 424 | 442 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 262 | 283 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 391 | 408 | 3.0E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 477 | 498 | 3.0E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2619 | 2643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2618 | 2643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| Coils | Coil | Coil | 1611 | 1631 | - | - |
| Coils | Coil | Coil | 844 | 889 | - | - |
| Coils | Coil | Coil | 2052 | 2086 | - | - |
| Coils | Coil | Coil | 1982 | 2002 | - | - |
| Coils | Coil | Coil | 534 | 554 | - | - |
| Coils | Coil | Coil | 607 | 655 | - | - |
| Coils | Coil | Coil | 1444 | 1471 | - | - |
| Coils | Coil | Coil | 2432 | 2473 | - | - |
| Coils | Coil | Coil | 2579 | 2613 | - | - |
| Coils | Coil | Coil | 2536 | 2556 | - | - |
| Coils | Coil | Coil | 2483 | 2517 | - | - |
| Coils | Coil | Coil | 2251 | 2271 | - | - |
| Coils | Coil | Coil | 933 | 953 | - | - |
| Coils | Coil | Coil | 1341 | 1379 | - | - |
| Coils | Coil | Coil | 2122 | 2142 | - | - |
| Coils | Coil | Coil | 1798 | 1825 | - | - |
| Coils | Coil | Coil | 957 | 977 | - | - |
| Coils | Coil | Coil | 2397 | 2424 | - | - |
| Coils | Coil | Coil | 1416 | 1436 | - | - |
| Coils | Coil | Coil | 780 | 800 | - | - |
| Coils | Coil | Coil | 979 | 999 | - | - |
| Coils | Coil | Coil | 1947 | 1974 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_034585169.1 | kinesin-like protein KIN-12F isoform X2 [Setaria viridis] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A2T8KLW5 | Kinesin motor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G480200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology