Basic Information
Locus ID:
Chr04G015920
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 41551989 | 41553600 | - | Chr04G015920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 57 | 93 | 1.4E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 54 | 97 | 1.19E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 51 | 100 | 1.9E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 53 | 101 | 9.762413 | IPR001810 |
| Coils | Coil | Coil | 414 | 414 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002442530.1 | uncharacterized protein LOC8084401 [Sorghum bicolor] | 0 |
| TrEMBL | A0A811RA45 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50206 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH05.4050, AH05.4051, BH02.1064, BH05.4152, CH05.4370 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0397900, gene-QOZ80_5AG0397910 ... |
| Poaceae | Sporobolus alterniflorus | 6 | Chr04G015920, Chr04G018650, Chr04G019030, Chr06G016670 ... |