Basic Information
Locus ID:
Chr04G014750
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 34014871 | 34015668 | + | Chr04G014750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 25 | 146 | 1.22141E-23 | IPR002083 |
| Pfam | PF00917 | MATH domain | 31 | 143 | 1.8E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 172 | 246 | 5.4E-19 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 22 | 156 | 1.55E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 245 | 1.96E-26 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 152 | 260 | 2.4E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 22 | 151 | 7.5E-26 | IPR008974 |
| SMART | SM00225 | BTB_4 | 181 | 263 | 1.9E-12 | IPR000210 |
| SMART | SM00061 | math_3 | 28 | 129 | 2.8E-6 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 23 | 146 | 15.35375 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 181 | 248 | 17.127741 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047083169.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TYF5 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology