Basic Information
Locus ID:
Chr04G013660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 24868252 | 24874530 | + | Chr04G013660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 358 | 414 | 8.2E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 191 | 246 | 6.9E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 352 | 417 | 2.62E-28 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 188 | 249 | 7.85E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 342 | 418 | 1.2E-33 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 175 | 250 | 1.5E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 190 | 248 | 8.7E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 357 | 416 | 5.4E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 191 | 249 | 24.248363 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 352 | 417 | 36.379978 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 290 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_008657198.2 | probable WRKY transcription factor 4 [Zea mays] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0A9G7H5 | WRKY domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology