Basic Information
Locus ID:
Chr04G011980
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 18343538 | 18350580 | + | Chr04G011980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 125 | 387 | 1.34543E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 126 | 388 | 2.1E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 416 | 570 | 7.71E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 125 | 431 | 1.48E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 406 | 497 | 1.7E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 215 | 403 | 2.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 119 | 214 | 7.9E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 413 | 567 | 1.7E-16 | - |
| SMART | SM00220 | serkin_6 | 126 | 388 | 7.5E-96 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 8.320626 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 388 | 50.109989 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 132 | 158 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004984283.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Setaria italica] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WI01 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_06487 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology