Basic Information
Locus ID:
Chr04G011400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 16966237 | 16969093 | + | Chr04G011400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 164 | 209 | 3.72774E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 170 | 209 | 1.6E-11 | IPR044034 |
| Pfam | PF01849 | NAC domain | 70 | 125 | 8.7E-22 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 171 | 208 | 1.2E-18 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 76 | 129 | 1.4E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 70 | 126 | 2.8E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 67 | 132 | 17.478951 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 56 | - | - |
| Coils | Coil | Coil | 6 | 31 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_004984363.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | K4AF92 | NAC-A/B domain-containing protein OS=Setaria italica OX=4555 GN=101754195 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology