Basic Information
Locus ID:
Chr04G009780
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 12855280 | 12861813 | - | Chr04G009780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 162 | 603 | 9.5E-218 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 163 | 595 | 3.93E-55 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 187 | 591 | 5.8E-15 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 128 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_002465359.1 | neutral/alkaline invertase 1, mitochondrial [Sorghum bicolor] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WIV5 | Alkaline/neutral invertase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_06875 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology