Basic Information
Locus ID:
Chr04G005770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 5762466 | 5766007 | - | Chr04G005770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 210 | 476 | 6.90677E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 207 | 473 | 7.8E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 184 | 477 | 3.55E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 177 | 279 | 5.0E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 489 | 1.8E-63 | - |
| SMART | SM00220 | serkin_6 | 204 | 482 | 1.5E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 204 | 481 | 37.657936 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 210 | 232 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 180 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039780224.1 | probable serine/threonine-protein kinase At1g01540 [Panicum virgatum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6S898 | Putative serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G39120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology