Basic Information
Locus ID:
Chr04G004610
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000004 | 4408632 | 4411860 | + | Chr04G004610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 269 | 327 | 6.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 717 | 1001 | 8.6E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 72 | 5.0E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 507 | 565 | 5.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 308 | 4.76E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 243 | 604 | 3.74E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 1004 | 1.5E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 383 | 627 | 5.5E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 283 | 4.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 705 | 807 | 2.8E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 186 | 7.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 382 | 2.6E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 808 | 1027 | 1.9E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 459 | 482 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 9.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 23.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 715 | 1004 | 1.6E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 1011 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 854 | 866 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 745 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 4.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 509 | 522 | 4.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6T8P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G546800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology