Basic Information
Locus ID:
Chr03G023970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 60954255 | 60957636 | + | Chr03G023970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 68 | 154 | 1.27166E-32 | - |
| Pfam | PF00855 | PWWP domain | 68 | 153 | 1.3E-13 | IPR000313 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 773 | 829 | 9.09E-5 | IPR035979 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 63 | 180 | 1.38E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 59 | 161 | 1.5E-21 | - |
| SMART | SM00293 | PWWP_4 | 68 | 129 | 5.9E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 70 | 131 | 13.029338 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 572 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 477 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNP3 | PWWP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology