Basic Information
Locus ID:
Chr03G023050
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 59896489 | 59913571 | + | Chr03G023050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 52 | 92 | 6.51364E-10 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 51 | 100 | 1.5E-13 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 531 | 698 | 2.6E-39 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 52 | 119 | 2.62E-13 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 43 | 140 | 1.9E-14 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 35 | 95 | 4.4E-5 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 37 | 103 | 13.845671 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 522 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_025818484.1 | uncharacterized protein LOC112894870 [Panicum hallii] | 0 |
| O13633 | Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7DC95 | J domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G035900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology