Basic Information
Locus ID:
Chr03G019670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
AFC1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 55847642 | 55851709 | - | Chr03G019670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 94 | 407 | 4.51491E-180 | - |
| Pfam | PF00069 | Protein kinase domain | 107 | 348 | 8.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 369 | 1.2E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 385 | 3.8E-101 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 94 | 187 | 3.8E-101 | - |
| SMART | SM00220 | serkin_6 | 107 | 438 | 2.7E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 397 | 34.039631 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_034596493.1 | serine/threonine-protein kinase AFC1-like [Setaria viridis] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9VMQ0 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_18692 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology