Basic Information
Locus ID:
Chr03G017640
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 53118569 | 53121138 | - | Chr03G017640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 28 | 133 | 3.2E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 496 | 9.6E-94 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 11 | 118 | 4.63E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 151 | 5.2E-10 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 101 | 10.033815 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 520 | 93.161263 | IPR027356 |
| Coils | Coil | Coil | 581 | 601 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_004970185.1 | BTB/POZ domain-containing protein At5g03250 [Setaria italica] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VH97 | NPH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16747 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology