Basic Information
Locus ID:
Chr03G015800
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 50027357 | 50030962 | + | Chr03G015800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 715 | 1004 | 2.8E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 141 | 2.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 302 | 361 | 7.1E-10 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 584 | 599 | 0.031 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 79 | 4.6E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 502 | 550 | 3.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 214 | 4.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 269 | 610 | 5.1E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 370 | 7.4E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 708 | 1005 | 2.46E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 372 | 9.2E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1028 | 3.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 298 | 2.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 797 | 1.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 639 | 5.2E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 195 | 1.1E-41 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 252 | 276 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 467 | 491 | 310.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 1004 | 7.9E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 179 | 203 | 39.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 1016 | 35.339958 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 747 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1061 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1043 | 1061 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology