Basic Information
Locus ID:
Chr03G006130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 9632372 | 9632712 | + | Chr03G006130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 32 | 71 | 2.42E-6 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 6 | 78 | 1.4E-6 | IPR015943 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 34 | 66 | 9.678328 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 34 | 66 | 11.577833 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002457205.1 | zinc finger CCCH domain-containing protein 17 [Sorghum bicolor] | 0 |
| TrEMBL | A0A0A9V9X8 | WD_REPEATS_REGION domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology