Basic Information
Locus ID:
Chr03G005090
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 6574585 | 6585681 | - | Chr03G005090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 5.2E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 306 | 575 | 2.0E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 100 | 159 | 5.3E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 579 | 9.19E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 200 | 7.23E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 274 | 381 | 7.8E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 620 | 2.7E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 1.4E-51 | IPR032675 |
| SMART | SM00220 | serkin_6 | 305 | 578 | 1.4E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 588 | 35.763981 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 125 | 138 | 9.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 146 | 159 | 9.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_004968347.1 | protein NSP-INTERACTING KINASE 3 [Setaria italica] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | K3XFI9 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766655 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology