Basic Information
Locus ID:
Chr03G003040
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 3030689 | 3034431 | + | Chr03G003040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 326 | 591 | 1.30669E-91 | - |
| CDD | cd09217 | TLP-P | 33 | 227 | 6.39229E-81 | - |
| Pfam | PF00314 | Thaumatin family | 37 | 227 | 3.8E-42 | IPR001938 |
| Pfam | PF00069 | Protein kinase domain | 323 | 587 | 6.7E-52 | IPR000719 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 30 | 228 | 1.83E-64 | IPR037176 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 303 | 590 | 4.45E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 394 | 605 | 6.8E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 393 | 2.0E-29 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 30 | 228 | 1.3E-63 | IPR037176 |
| SMART | SM00220 | serkin_6 | 320 | 589 | 1.0E-41 | IPR000719 |
| SMART | SM00205 | tha2 | 33 | 227 | 4.3E-74 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 320 | 604 | 41.078365 | IPR000719 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 30 | 227 | 37.133774 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 87 | 102 | - | IPR017949 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 326 | 347 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 124 | 140 | 1.3E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 217 | 226 | 1.3E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 74 | 85 | 1.3E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 32 | 44 | 1.3E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 87 | 116 | 1.3E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 52 | 61 | 1.3E-40 | IPR001938 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_025802906.1 | PR5-like receptor kinase [Panicum hallii] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PBY9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PMPSC052026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology