Basic Information
Locus ID:
Chr03G002570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000003 | 2489079 | 2491982 | - | Chr03G002570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 696 | 964 | 1.41606E-87 | - |
| Pfam | PF13855 | Leucine rich repeat | 152 | 210 | 1.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 489 | 547 | 6.8E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 692 | 891 | 4.5E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 3.8E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 391 | 577 | 1.25E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 342 | 1.7E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 961 | 1.75E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 144 | 4.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 243 | 5.8E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 965 | 3.4E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 244 | 363 | 9.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 368 | 587 | 2.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 651 | 765 | 2.2E-27 | - |
| SMART | SM00220 | serkin_6 | 690 | 954 | 2.2E-39 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 560 | 582 | 7.303818 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 967 | 38.237431 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 718 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 510 | 523 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 307 | 320 | 2.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025818181.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7DPU8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G444100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology