Basic Information
Locus ID:
Chr02G029890
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 61401590 | 61404571 | + | Chr02G029890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 201 | 224 | 0.014 | IPR001611 |
| Pfam | PF00646 | F-box domain | 48 | 88 | 0.0032 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 44 | 83 | 5.07E-5 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 168 | 626 | 8.89E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 127 | 241 | 2.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 492 | 624 | 1.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 433 | 491 | 9.0E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 242 | 432 | 1.4E-28 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 201 | 226 | 1.2E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 385 | 410 | 490.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 545 | 569 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 359 | 384 | 0.022 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 439 | 464 | 4.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 492 | 517 | 0.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 253 | 278 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 333 | 358 | 52.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 227 | 252 | 0.96 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 175 | 200 | 0.041 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 465 | 490 | 0.17 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 519 | 544 | 0.004 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_034590816.1 | EIN3-binding F-box protein 1-like [Setaria viridis] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology